Publications

Peer-Reviewed Articles

Geller-McGrath, D., Mara, P., Taylor, G.T., Suter, E.A., Edgcomb, V., Pachiadaki, M. (2023) Diverse secondary metabolites are expressed from particle-associated and free-living microorganisms of the permanently anoxic Cariaco Basin. Nature Communications. doi: 10.1038/s41467-023-36026-w

Suter, E.A., Pachiadaki, M., Taylor, G.T., Edgcomb, V.E. (2022) Eukaryotic parasites are integral to a productive microbial food web in oxygen-depleted waters. Frontiers in Microbiology. doi: 10.3389/fmicb.2021.764605

Tully, B.J, Buongiorno, J. Cohen, A.B., Cram, J.A., Garber, A.I., Hu, S.K., Krinos, A.I., Leftwich, P.T., Marshall, A., Sieradzki, E.T., Speth, D.R. Suter, E.A., Trivedi, C.B., Valentin-Alvarado, L.E., Weissman, J.L, Lee, M.D, Alexander, H., Collins, R.E., Pachiadaki, M., Rhodes, A.C.E, Decatur, W. (2021) The Bioinformatics Virtual Coordination Network: An open-source and interactive learning environment. Frontiers in Education. doi: 10.3389/feduc.2021.711618.

Suter, E.A., Pachiadaki, M. Edgcomb, V., Scranton M., Montes, E. Taylor, G.T. (2020) Diverse nitrogen cycling pathways across a marine oxygen gradient indicate nitrogen loss coupled to chemoautotrophic activity. Environmental Microbiology. doi: 10.1111/1462‐2920.15187.

Mara, P., Vik, D., Pachiadaki, M.G., Suter, E.A., Taylor, G.T., Sullivan, M., Poulos, B., Edgcomb V.P. (2020) Viruses and their auxiliary metabolic genes along the redoxcline of the permanently stratified Cariaco Basin. ISME Journal. doi: 10.1038/s41396-020-00739-3.

Spanbauer, T., Briseno. C., Pitz, K., Suter, E.A. (2019) Salty sensors, fresh ideas: The use of molecular and imaging sensors in understanding plankton dynamics across marine and freshwater ecosystems. Limnol. Oceanogr., 5: 169-184. doi: 10.1002/lol2.10128.

Suter, E.A., Pachiadaki, M. Taylor, G.T., Y. Astor, Edgcomb, V. (2018) Free-living chemoautotrophic and particle-associated heterotrophic prokaryotes dominate microbial assemblages along a pelagic redox gradient. Environmental Microbiology. 20(2):693-712. doi: 10.1111/1462-2920.13997.

Millette, N.C., Grosse, J., Johnson, W., Jungbluth, M., Suter, E.A. (2018) Hidden in plain sight: The importance of cryptic interactions in marine plankton. Limnology and Oceanography Letters. 3: 341-356. doi: 10.1002/lol2.10084.

Taylor, G.T., Suter, E.A., Pachiadaki, Astor, Y., M. Edgcomb, V., Scranton, M. (2017) Temporal shifts in dominant sulfur-oxidizing chemoautotrophic populations across the Cariaco Basin’s redoxcline. Deep-Sea Res. Part II: Special Issue on Ocean Deoxygenation. 156: 80-96. doi: 10.1016/j.dsr2.2017.11.016.

Taylor, G.T., Suter E.A., Li, Z.Q., Chow, S.C., Stinton, D., Zaliznyack, T., Beaupre, S.R. (2017) Single cell growth rates in photoautotrophic populations measured by stable isotopic probing and resonance Raman microspectrometry. Frontiers in Microbiology. 8:1-16. doi: 10.3389/fmicb.2017.01449.

Cernadas-Martín, S., Suter, E.A., Scranton, M.I., Astor, Y. Taylor, G.T. (2017) Aerobic and anaerobic ammonium oxidizers in the Cariaco Basin: Distributions of major taxa and nitrogen species across the redoxcline. Aquatic Microbial Ecology. 79:31-48. doi: 10.3354/ame01817.

Suter, E.A., Scranton, M.I., Chow, S., Stinton, D., Medina Faull, L., Taylor, G.T. (2016) Niskin bottle sample collection aliases microbial community composition and biogeochemical interpretation. Limnology and Oceanography. doi: 10.1002/lno.10447.

Suter, E.A., Lwiza, K.M.M., Rose, J.M., Gobler, C., Taylor, G.T. (2014) Phytoplankton assemblage changes during decadal decreases in nitrogen loadings to the urbanized Long Island Sound estuary, USA. Marine Ecology Progress Series. 497: 51-67. doi: 10.3354/meps10602.

Suter, E., Juhl, A., O’Mullan, G. (2011). Particle Association for Enterococcus and Total Bacteria in the Lower Hudson River Estuary, U.S.A. Journal of Water Resource and Protection. 3: 715-725. doi: 10.4236/jwarp.2011.310082.

Other Publications

Educational Modules:

Bioinformatics Virtual Coordination Network: Home page, Wiki, and Videos

Suter, E.A., Corbo, C., Blaize, J. (2019) Creating a Winogradsky Column: A Method to Enrich the Microbial Species in a Sediment Sample. JoVE Journal of Visualized Experiments. - Video protocol

Corbo, C., Blaize, J., Suter, E.A. (2019) Enrichment Cultures: Culturing Aerobic and Anaerobic Microbes on Selective and Differential Media. JoVE Journal of Visualized Experiments. - Video protocol

Blaize, J., Suter, E.A., Corbo, C. (2019) Serial Dilutions and Plating: Microbial Enumeration. JoVE Journal of Visualized Experiments. - Video protocol

Protocols:

Taylor, G.T., Li, Z.Q., Suter E.A., Chow, S.C. (2017) Modified Filter-Transfer-Freeze (“FTF”) Technique for Raman Microspectroscopic Analysis of Single Cells. Protocols.io. doi: 10.17504/protocols.io.ikqccvw